adamstruck/RECD: Repeat Exansion & Contraction Detection

This package uses the .dat output file from Tandem Repeat Finder (G. Benson, Nucleic Acids Research, 1999). Recommended parameters are "2 12 12 80 10 16 8 -d". A python executable is provided in the package that will parse the .dat file produced by TRF and output it in a useable tsv format.

install.packages("remotes")
remotes::install_github("adamstruck/RECD")