calculatePercentFacing: calculatePercentFacing
In adamstruck/RECD: Repeat Exansion & Contraction Detection
Description
Usage
Arguments
Details
Value
Author(s)
Description
Calculate the ratio of facing to flanking read pairs for
each repeat.
Usage
1
2
calculatePercentFacing(facing_file, flanking_file,
output_dir)
Arguments
facing_file
.facing file
flanking_file
.flanking file
output_dir
path to output results
Details
ratio = [ facing / ( flanking + facing ) ] * 100
Value
TSV file
Author(s)
Adam Struck - Intern
adamstruck/RECD documentation built on May 10, 2019, 5:51 a.m.
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Description Usage Arguments Details Value Author(s)
Description
Calculate the ratio of facing to flanking read pairs for each repeat.
Usage
1 2 | calculatePercentFacing(facing_file, flanking_file,
output_dir)
|
Arguments
facing_file |
.facing file |
flanking_file |
.flanking file |
output_dir |
path to output results |
Details
ratio = [ facing / ( flanking + facing ) ] * 100
Value
TSV file
Author(s)
Adam Struck - Intern
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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