Description Usage Arguments Details Value Author(s)
Try to detect repeats that have gotten longer than the typical inner mate distance
1 | edgeRAnalysis(countsTable, designTable, output_file)
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countsTable |
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designTable |
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output_file |
path to and name of file to output results to. |
Uses the edgeR package to try and detect differential read class frequencies (facing versus flanking) between tumor and normal samples.
TSV file
Adam Struck - Intern
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