Man pages for adamstruck/RECD
Repeat Exansion & Contraction Detection

calculateIRLscalculateIRLs
calculateIRLs_jointMLEcalculateIRLs_MLE
calculateIRLs_MLEcalculateIRLs_MLE
calculateIRLs_normcalculateIRLs_norm
calculatePercentFacingcalculatePercentFacing
compareSampleGroupscompareSampleGroups
dbCreateRepeatsTabledbCreateRepeatsTable
DEXSeqAnalysisDEXSeqAnalysis
downloadSatellogdownloadSatellog
edgeRAnalysisedgeRAnalysis
FacingVersusFlankingFacingVersusFlanking
FacingVersusFlankingDEseqFacingVersusFlankingDEseq
makeDEXSeqTablesmakeDEXSeqTables
makeEdgeRTablesmakeEdgeRTables
mapATRmapATR [mapAlignmentsToRepeats]
mergeSampleDatamergeSampleData
openOutputFileHandleopenOutputFileHandle
processLastAlignedBaseprocessLastAlignedBase
RepeatsInRegionRepeatsInRegion
updateSatellogCoordinatesupdateSatellogCoordinates
writeResultswriteResults
adamstruck/RECD documentation built on June 3, 2017, 1:46 p.m.