CodeSegments: Code all segments in all samples in the cohort
In afrangou/CleanCNA: Calling and recalling subclonal copy number using SNP and SNV information to provide a high quality set of copy number profiles.
Description
Usage
Arguments
Value
Description
Codes all segments as a particular CNA type from across the cohort
Usage
1
CodeSegments(segfile_dir, segfile_name)
Arguments
segfile_dir
= where segfile will go
segfile_name = cohort name
Value
A table for use with bedtools etc
afrangou/CleanCNA documentation built on Dec. 28, 2021, 8:21 p.m.
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Description Usage Arguments Value
Description
Codes all segments as a particular CNA type from across the cohort
Usage
1 | CodeSegments(segfile_dir, segfile_name)
|
Arguments
segfile_dir |
= where segfile will go segfile_name = cohort name |
Value
A table for use with bedtools etc
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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