PrepDataForSummary: Make summary table with filepaths for required files...
In afrangou/CleanCNA: Calling and recalling subclonal copy number using SNP and SNV information to provide a high quality set of copy number profiles.
Description
Usage
Arguments
Value
Description
Converts snv counts from vcf into input format for DPClust
Usage
1
prepDataForSummary(qctabledir, subclonesdir)
Arguments
Filepath
of QualityControl.tsv file
Dir of subclones and cellularity files
Value
A summary table for producing CNA summary plots
afrangou/CleanCNA documentation built on Dec. 28, 2021, 8:21 p.m.
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Description Usage Arguments Value
Description
Converts snv counts from vcf into input format for DPClust
Usage
1 | prepDataForSummary(qctabledir, subclonesdir)
|
Arguments
Filepath |
of QualityControl.tsv file Dir of subclones and cellularity files |
Value
A summary table for producing CNA summary plots
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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