GenomewideStackedBarPlot: Create stacked bar plot

Description Usage Arguments Value

View source: R/GenomewideStackedBarPlot.R

Description

Create stacked barplot for 6 different CNA types homdel, loh, otherloss, nochange, gain, biggain, split into loss, no change, and gain

Usage

1
GenomewideStackedBarPlot(filestub, segfile_name, number_samples)

Arguments

filestub

= dir (with trailling slash) containing *_partitioned_regions_all_CNA_types_overlapped.out files for all cna types segfile_name = label of cohort, eg 'TGCT'

Value

Prepped data Stacked barplot


afrangou/CleanCNA documentation built on Dec. 28, 2021, 8:21 p.m.