CollateSubclones: Collate all segments in all samples in the cohort
In afrangou/CleanCNA: Calling and recalling subclonal copy number using SNP and SNV information to provide a high quality set of copy number profiles.
Description
Usage
Arguments
Value
View source: R/CollateSubclones.R
Description
Prepares subclones info to label copy number of segments
Usage
1
CollateSubclones(qc, segfile_dir, segfile_name)
Arguments
qc
table from PrepDataForSummary
segfile_dir = where segfile will go
segfile_name = cohort name
Value
A table with all segments from all subclones files collated
afrangou/CleanCNA documentation built on Dec. 28, 2021, 8:21 p.m.
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Description Usage Arguments Value
View source: R/CollateSubclones.R
Description
Prepares subclones info to label copy number of segments
Usage
1 | CollateSubclones(qc, segfile_dir, segfile_name)
|
Arguments
qc |
table from PrepDataForSummary segfile_dir = where segfile will go segfile_name = cohort name |
Value
A table with all segments from all subclones files collated
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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