joinSegmentNeighbours: Join directly neighbouring segments produced by methSeg
In al2na/methylKit: DNA methylation analysis from high-throughput bisulfite sequencing results
joinSegmentNeighbours R Documentation
Join directly neighbouring segments produced by methSeg
Description
Segmentation and clustering are two distinct steps in methSeg(),
leading to adjacent segments of the same class.
This leads to a bias segment length distributions,
which is removed by joining those neighbours.
Usage
joinSegmentNeighbours(res)
Arguments
res
A GRanges object with segment
classification and information prudoced by methSeg
Value
A GRanges object with segment
classification and information.
See Also
methSeg
al2na/methylKit documentation built on Jan. 12, 2025, 7:56 a.m.
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| joinSegmentNeighbours | R Documentation |
Join directly neighbouring segments produced by methSeg
Description
Segmentation and clustering are two distinct steps in methSeg(), leading to adjacent segments of the same class. This leads to a bias segment length distributions, which is removed by joining those neighbours.
Usage
joinSegmentNeighbours(res)
Arguments
res |
A |
Value
A GRanges object with segment
classification and information.
See Also
methSeg
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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