bed.sort: Bed Sort
In avhgenomics/bioKIT: bioKIT: Common functions for routine molecular biology applications.
Description
Usage
Arguments
Value
Examples
Description
Takes a bed file, sorts it by chromosome and start, then writes it to the output location.
Usage
1
bed.sort(bed_file_path, output_path)
Arguments
bed_file_path
path to the unsorted bed file.
output_path
path to the sorted bed file, the output.
Value
returns a bed file.
Examples
1
# bed.sort(bed_file_path = "R/locations.bed",output_path = "R/locations_sorted.bed")
avhgenomics/bioKIT documentation built on May 5, 2019, 12:29 a.m.
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Description Usage Arguments Value Examples
Description
Takes a bed file, sorts it by chromosome and start, then writes it to the output location.
Usage
1 | bed.sort(bed_file_path, output_path)
|
Arguments
bed_file_path |
path to the unsorted bed file. |
output_path |
path to the sorted bed file, the output. |
Value
returns a bed file.
Examples
1 | # bed.sort(bed_file_path = "R/locations.bed",output_path = "R/locations_sorted.bed")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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