calculate_reagents: FUNCTION_TITLE

In avhgenomics/bioKIT: bioKIT: Common functions for routine molecular biology applications.

Description

FUNCTION_DESCRIPTION

Usage

calculate_reagents(buffers.df = NULL, Experiment = NULL, Buffer = NULL,
  amount_per_value = NULL, amount_per_unit = NULL, amount_needed = NULL,
  amount_type = NULL, Experiment_col = 1, Buffer_col = 2,
  Reagent_col = 3, Stock_conc_col = 4, Stock_unit_col = 5,
  Final_conc_col = 6, Final_unit_col = 7)

Arguments

buffers.df	dataframe containing your buffer recipes
Experiment	string to filter by experiment. ex: "PCR"
Buffer	string to filter by buffer. ex: "6x loading dye"
amount_per_value	a numeric value as part of the base recipe for 1 ml/sample. ex: 5, ex: df$amount.per.ml
amount_per_unit	a string as part of the base recipe for 1 ml/sample. ex: "ul, ex: df$amount.unit
amount_needed	a numeric value for how much of the buffer is needed.
amount_type	the unit, as a string, for the amount needed
Experiment_col	number of experiment col, if custom
Buffer_col	number of buffer col, if custom
Reagent_col	number of reagent col, if custom
Stock_conc_col	number of stock concentration col, if custom
Stock_unit_col	number of stock unit col, if custom
Final_conc_col	number of final concentration col, if custom
Final_unit_col	number of final unit col, if custom

Value

a dataframe with the calculations.

Examples

# ADD_EXAMPLES_HERE

avhgenomics/bioKIT documentation built on May 5, 2019, 12:29 a.m.