png_pedmap: Papua New Guinea Plasmodium Falciparum Dataset
In bahlolab/isoRelate: Identity-by-Descent Inference of Haploid Recombining Organisms
Description
A PED/MAP file containing gneotype information for 38 isolates
from Madang, Papua New Guinea. This dataset was released as part
of the MalariaGEN Pf3k consortium in VCF file format, which underwent
extensive data processing to result in the final SNP set in the
PED/MAP file. This data, and more, is available from
https://www.malariagen.net/projects/pf3k.
Usage
1
Format
List with two objects
- PED
PLINK PED data frame. See getGenotypes for details.
- MAP
PLINK MAP data frame. See getGenotypes for details.
See getGenotypes for details.
bahlolab/isoRelate documentation built on May 11, 2019, 5:25 p.m.
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Description
A PED/MAP file containing gneotype information for 38 isolates from Madang, Papua New Guinea. This dataset was released as part of the MalariaGEN Pf3k consortium in VCF file format, which underwent extensive data processing to result in the final SNP set in the PED/MAP file. This data, and more, is available from https://www.malariagen.net/projects/pf3k.
Usage
1 |
Format
List with two objects
- PED
PLINK PED data frame. See
getGenotypesfor details.- MAP
PLINK MAP data frame. See
getGenotypesfor details.
See getGenotypes for details.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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