transitionProbDD: The transition probabilities for 2 diploid chromosomes
In bahlolab/isoRelate: Identity-by-Descent Inference of Haploid Recombining Organisms
Description
The transition probabilities for 2 diploid chromosomes
Usage
1
2
transitionProbDD(omega_0, omega_1, omega_2, meiosis, dist_cM, ibd_current,
ibd_previous)
Arguments
omega_0
The probability of sharing 0 alleles IBD
omega_1
The probability of sharing 1 allele IBD
omega_2
The probability of sharing 2 alleles IBD
meiosis
The number of meiosis separating the two isoaltes
dist_cM
The genetic map distance (cM) between SNP i and SNP j
ibd_current
The IBD state of SNP j
ibd_previous
The IBD state of SNP i
bahlolab/isoRelate documentation built on May 11, 2019, 5:25 p.m.
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Description
The transition probabilities for 2 diploid chromosomes
Usage
1 2 | transitionProbDD(omega_0, omega_1, omega_2, meiosis, dist_cM, ibd_current,
ibd_previous)
|
Arguments
omega_0 |
The probability of sharing 0 alleles IBD |
omega_1 |
The probability of sharing 1 allele IBD |
omega_2 |
The probability of sharing 2 alleles IBD |
meiosis |
The number of meiosis separating the two isoaltes |
dist_cM |
The genetic map distance (cM) between SNP i and SNP j |
ibd_current |
The IBD state of SNP j |
ibd_previous |
The IBD state of SNP i |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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