bartongroup/Proteus: Downstream analysis of the MaxQuant output
Proteus is a package for downstream analysis of MaxQuant evidence data in R environment. It provides a variety of tools for peptide and protein aggregation, quality checks, data exploration and visualisation, including interactive analysis utilising Shiny framework. Proteus performs differential expression with limma, offering a robust treatment of missing data, with no need for (random) imputation.
Getting started
Browse package contents
Package details |
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| Bioconductor views | MassSpectrometry Proteomics |
| Maintainer | Marek Gierlinski <M.Gierlinski@dundee.ac.uk> |
| License | GPL-2 |
| Version | 0.2.16 |
| URL | https://github.com/bartongroup/Proteus |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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