plotVolcano_live: Volcano plot in live Shiny session

In bartongroup/Proteus: Downstream analysis of the MaxQuant output

Volcano plot in live Shiny session

Description

plotVolcano_live makes a volcano plot from limma results.

Usage

plotVolcano_live(pdat, res, max_points = 100)

Arguments

pdat	Protein proteusData object.
res	Result table from limmaDE.
max_points	Maximum number of points that can be selected.

Value

A shiny session hosted locally.

Examples

library(shiny)
library(proteusLabelFree)
data(proteusLabelFree)
prodat.med <- normalizeData(prodat)
res <- limmaDE(prodat.med)
## Not run: 
plotVolcano_live(prodat.med, res)

## End(Not run)

bartongroup/Proteus documentation built on April 22, 2023, 5:33 a.m.