plotPdist: Plot p-value distribution

In bartongroup/Proteus: Downstream analysis of the MaxQuant output

Plot p-value distribution

Description

plotPdist makes a plot with distribution of raw p-values, obtained by limmaDE.

Usage

plotPdist(res, bin.size = 0.02, text.size = 12, plot.grid = TRUE)

Arguments

res	Output table from limmaDE.
bin.size	Bin size for the histogram.
text.size	Text size.
plot.grid	Logical to plot grid.

Value

A ggplot object.

Examples

library(proteusLabelFree)
data(proteusLabelFree)
prodat.med <- normalizeData(prodat)
res <- limmaDE(prodat.med)
plotPdist(res)

bartongroup/Proteus documentation built on April 22, 2023, 5:33 a.m.