createGiottoInstructions: createGiottoInstructions

In bernard2012/Giotto: Spatial single-cell transcriptomics toolbox

Description

Function to set global instructions for giotto functions

Usage

createGiottoInstructions(
  python_path = NULL,
  show_plot = NULL,
  return_plot = NULL,
  save_plot = NULL,
  save_dir = NULL,
  plot_format = NULL,
  dpi = NULL,
  units = NULL,
  height = NULL,
  width = NULL
)

Arguments

python_path	path to python binary to use
show_plot	print plot to console, default = TRUE
return_plot	return plot as object, default = TRUE
save_plot	automatically save plot, dafault = FALSE
save_dir	path to directory where to save plots
plot_format	format of plots (defaults to png)
dpi	resolution for raster images
units	units of format (defaults to in)
height	height of plots
width	width of plots

Value

named vector with giotto instructions

See Also

More online information can be found here https://rubd.github.io/Giotto_site/articles/instructions_and_plotting.html

Examples

    createGiottoInstructions()

bernard2012/Giotto documentation built on Sept. 22, 2020, 10:29 a.m.