plot_network_layer_ggplot: plot_network_layer_ggplot
In bernard2012/Giotto: Spatial single-cell transcriptomics toolbox
Description
Usage
Arguments
Details
Value
View source: R/spatial_visuals.R
Description
Visualize cells in network layer according to dimension reduction coordinates
Usage
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plot_network_layer_ggplot(
ggobject,
annotated_network_DT,
edge_alpha = NULL,
show_legend = T
)
Arguments
annotated_network_DT
annotated network data.table of selected cells
edge_alpha
alpha of network edges
show_legend
show legend
gobject
giotto object
Details
Description of parameters.
Value
ggplot
bernard2012/Giotto documentation built on Sept. 22, 2020, 10:29 a.m.
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Description Usage Arguments Details Value
View source: R/spatial_visuals.R
Description
Visualize cells in network layer according to dimension reduction coordinates
Usage
1 2 3 4 5 6 | plot_network_layer_ggplot(
ggobject,
annotated_network_DT,
edge_alpha = NULL,
show_legend = T
)
|
Arguments
annotated_network_DT |
annotated network data.table of selected cells |
edge_alpha |
alpha of network edges |
show_legend |
show legend |
gobject |
giotto object |
Details
Description of parameters.
Value
ggplot
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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