updateGiottoImage: updateGiottoImage

In bernard2012/Giotto: Spatial single-cell transcriptomics toolbox

Description

Updates the boundaries of a giotto image attached to a giotto object

Usage

updateGiottoImage(
  gobject,
  image_name,
  xmax_adj = 0,
  xmin_adj = 0,
  ymax_adj = 0,
  ymin_adj = 0,
  return_gobject = TRUE
)

Arguments

gobject	giotto object
image_name	spatial locations
xmax_adj	adjustment of the maximum x-value to align the image
xmin_adj	adjustment of the minimum x-value to align the image
ymax_adj	adjustment of the maximum y-value to align the image
ymin_adj	adjustment of the minimum y-value to align the image
return_gobject	return a giotto object

Value

a giotto object or an updated giotto image if return_gobject = F

Examples

    updateGiottoImage(gobject)

bernard2012/Giotto documentation built on Sept. 22, 2020, 10:29 a.m.