cell_annotation_params_fn: Load a list of cell annotation references into a 'tibble'.
In bioinfocz/scdrake: A pipeline for droplet-based single-cell RNA-seq data secondary analysis implemented in the drake Make-like toolkit for R language
View source: R/cell_annotation.R
cell_annotation_params_fn R Documentation
Load a list of cell annotation references into a tibble.
Description
Cell annotation references are defined in 02_norm_clustering.yaml (single-sample) and
02_int_clustering.yaml (integration) config files in CELL_ANNOTATION_SOURCES parameter.
Usage
cell_annotation_params_fn(cell_annotation_sources, biomart_dataset = NULL)
Arguments
cell_annotation_sources
A list of cell annotation reference sources.
biomart_dataset
Currently not used.
Value
A tibble. Output target: cell_annotation_params
bioinfocz/scdrake documentation built on Jan. 29, 2024, 10:24 a.m.
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View source: R/cell_annotation.R
| cell_annotation_params_fn | R Documentation |
Load a list of cell annotation references into a tibble.
Description
Cell annotation references are defined in 02_norm_clustering.yaml (single-sample) and
02_int_clustering.yaml (integration) config files in CELL_ANNOTATION_SOURCES parameter.
Usage
cell_annotation_params_fn(cell_annotation_sources, biomart_dataset = NULL)
Arguments
cell_annotation_sources |
A list of cell annotation reference sources. |
biomart_dataset |
Currently not used. |
Value
A tibble. Output target: cell_annotation_params
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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