check_scdrake: Check for selected 'scdrake' dependencies.
In bioinfocz/scdrake: A pipeline for droplet-based single-cell RNA-seq data secondary analysis implemented in the drake Make-like toolkit for R language
check_scdrake R Documentation
Check for selected scdrake dependencies.
Description
This function will check for:
Packages that might not be installed by default:
qs,
clustermq,
future,
future.callr (if the system doesn't support forking/multicore),
SC3 (if it is not installed from <github.com/gorgitko/SC3>)
If pandoc is available.
If yq is available.
Usage
check_scdrake(verbose = TRUE)
Arguments
verbose
A logical scalar: if TRUE, be verbose.
Value
Invisibly TRUE if all checks return TRUE, FALSE otherwise.
bioinfocz/scdrake documentation built on Jan. 29, 2024, 10:24 a.m.
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| check_scdrake | R Documentation |
Check for selected scdrake dependencies.
Description
This function will check for:
Packages that might not be installed by default: qs, clustermq, future, future.callr (if the system doesn't support forking/multicore), SC3 (if it is not installed from <github.com/gorgitko/SC3>)
If pandoc is available.
If yq is available.
Usage
check_scdrake(verbose = TRUE)
Arguments
verbose |
A logical scalar: if |
Value
Invisibly TRUE if all checks return TRUE, FALSE otherwise.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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