dimred_plots_other_vars_params_df_fn: Make a tibble with parameters for dimred plots of selected...

In bioinfocz/scdrake: A pipeline for droplet-based single-cell RNA-seq data secondary analysis implemented in the drake Make-like toolkit for R language

Make a tibble with parameters for dimred plots of selected variables.

Description

Make a tibble with parameters for dimred plots of selected variables.

Usage

dimred_plots_other_vars_params_df_fn(
  dimred_names,
  dimred_plots_other,
  out_dir = NULL
)

Arguments

dimred_names	A character vector: names of dimreds.
dimred_plots_other	A named list: see NORM_CLUSTERING_REPORT_DIMRED_PLOTS_OTHER parameter in ⁠02_norm_clustering.yaml⁠ or ⁠02_int_clustering.yaml⁠ config.
out_dir	A character scalar: output directory in which PDF and PNG files will be later saved.

Value

A tibble. Output target: dimred_plots_other_vars_params

bioinfocz/scdrake documentation built on Jan. 29, 2024, 10:24 a.m.