Description Usage Arguments Value Author(s) References See Also
This function constructs gene tree vectors from gene trees across loci. The gene tree vectors can be used to construct maximum tree by the function maxtree
.
1 | genetree.vector(filenames,outputfile)
|
filenames |
the gene tree files |
outputfile |
the output file |
The function returns a matrix of gene trees. Each row represents a gene tree vector. The gene tree vector consists of trees from multiple gene tree files.
Liang Liu lliu@uga.edu
Liu, L. and D.K. Pearl. Species trees from gene trees: reconstructing Bayesian posterior distributions of a species phylogeny using estimated gene tree distributions. Systematic Biology, 2007, 56:504-514.
Edwards, S.V., L. Liu., and D.K. Pearl. High resolution species trees without concatenation. PNAS, 2007, 104:5936-5941.
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