Description Usage Arguments Value Author(s) See Also Examples
The function computes all pairwise distances among taxa in the tree.
1 | pair.dist(nodematrix, nspecies)
|
nodematrix |
the tree node matrix |
nspecies |
the number of taxa in the tree |
The function returns a distance matrix.
Liang Liu lliu@uga.edu
1 2 3 | treestr<-"((((H:0.00402,C:0.00402):0.00304,G:0.00705):0.00929,O:0.01635):0.1,W:0.11635);"
nodematrix<-read.tree.nodes(treestr)$nodes
pair.dist(nodematrix,5)
|
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