root.tree: Root a tree
In bomeara/phybase: Basic functions for phylogenetic analysis
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Root a tree.
Usage
1
root.tree(nodematrix,outgroup)
Arguments
nodematrix
the tree node matrix
outgroup
the node used as outgroup
Value
The function returns a rooted tree.
Author(s)
Liang Liu lliu@uga.edu
See Also
Examples
1
2
3
data(unrooted.tree)
nodematrix<-read.tree.nodes(unrooted.tree[1])$nodes
root.tree(nodematrix,23)
bomeara/phybase documentation built on May 12, 2019, 11:35 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Root a tree.
Usage
1 | root.tree(nodematrix,outgroup)
|
Arguments
nodematrix |
the tree node matrix |
outgroup |
the node used as outgroup |
Value
The function returns a rooted tree.
Author(s)
Liang Liu lliu@uga.edu
See Also
Examples
1 2 3 | data(unrooted.tree)
nodematrix<-read.tree.nodes(unrooted.tree[1])$nodes
root.tree(nodematrix,23)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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