PlotOptimizationIterations: PlotOptimizationIterations

In cgab-ncc/FIREVAT: FIREVAT, FInding REliable Variants without ArTifacts

PlotOptimizationIterations

Description

Plots multiple scatter plots into one figure

Usage

PlotOptimizationIterations(
  df,
  columns.to.plot,
  x.axis.var,
  x.axis.title,
  x.min,
  x.max,
  save.file,
  title,
  y.axis.title = "",
  y.max = 1,
  point.size = 1,
  connect.dots = T,
  plot.legend = T,
  legend.ncol = 1,
  font.size.med = 14,
  font.size.large = 16,
  plot.margin = unit(c(0.5, 0.5, 0.5, 0.5), "cm")
)

Arguments

df	A data.frame (from reading "FIREVAT_Optimization_Logs.tsv")
columns.to.plot	A character vector (of column names to plot)
x.axis.var	x axis variable
x.axis.title	x axis title
x.min	x axis minimum value
x.max	x axis maximum value
save.file	Filename (including full path) to which the plot will be saved
title	Plot title
y.axis.title	y axis title; Default = ""
y.max	y axis maximum value; Default = 1
point.size	Point size; Default = 1
connect.dots	If True draws dots for each iteration; Default = True
plot.legend	If True write legend of plot; Default = T
legend.ncol	legend.n Default = 1
font.size.med	Medium font size; Default = 14
font.size.large	Large font size; Default = 16
plot.margin	Margin vector for plot; Default = unit(c(0.5, 0.5, 0.5, 0.5), "cm"))

Value

A ggplot object

cgab-ncc/FIREVAT documentation built on Nov. 19, 2022, 5:55 p.m.