API for cgmisc-team/cgmisc
Various functions useful in computational genetics, e.g. in GWAS.

Global functions
PHASE.to.FASTA Man page
PHASE.to.Haploview Man page
PHASE2FASTA Man page
PHASE2Haploview Man page
bigRR.data Man page
bigRR.data-class Man page
boxplot.snp Man page Source code
boxplot.snp.twoWay Man page Source code
cgmisc Man page
cgmisc-package Man page
choose.top.snps Man page Source code
chr.x.fix.canfam Man page Source code
clump.markers Man page Source code
compute.Fstats Man page
compute.fstats Man page Source code
create.Haploview.info Man page
create.haploview.info Man page Source code
epistasis.scan Man page Source code
fstats.result Man page
fstats.result-class Man page
get.LD.colors Man page
get.adjacent.markers Man page Source code
get.chr.midpoints Man page Source code
get.erv Man page Source code
get.ld.colors Man page Source code
get.overlap.windows Man page Source code
get.roh Man page Source code
gwaa.to.PHASE Man page
gwaa.to.bed Man page Source code
gwaa.to.bigRR Man page
gwaa.to.bigrr Man page Source code
gwaa.to.phase Man page Source code
gwaa.to.vGWAS Man page
gwaa.to.vgwas Man page Source code
gwaa2PHASE Man page
gwaa2bed Man page
gwaa2bigRR Man page
gwaa2bigrr Man page
gwaa2phase Man page
gwaa2vGWAS Man page
gwaa2vgwas Man page
het.overlap.wind Man page Source code
onAttach Source code
open.region.UCSC Man page
open.region.ucsc Man page Source code
pac.result Man page
pac.result-class Man page
phase.to.fasta Man page Source code
phase.to.haploview Man page Source code
phase2fasta Man page
phase2haploview Man page
plot.Fst Man page
plot.LD.decay Man page
plot.clumps Man page Source code
plot.erv Man page Source code
plot.fstats Man page Source code
plot.genes Man page Source code
plot.ld.decay Man page Source code
plot.manhattan.LD Man page
plot.manhattan.genes Man page Source code
plot.manhattan.ld Man page Source code
plot.overlap Man page Source code
plot.pac Man page Source code
plot.qq Man page Source code
pop.allele.counts Man page Source code
cgmisc-team/cgmisc documentation built on May 12, 2017, 1:18 a.m.