open.region.ucsc: Open UCSC GenomeBrowser for selected region
In cgmisc-team/cgmisc: Various functions useful in computational genetics, e.g. in GWAS
View source: R/open.region.UCSC.R
open.region.ucsc R Documentation
Open UCSC GenomeBrowser for selected region
Description
open.region.UCSC redirects you to the UCSC GenomeBrowser and shows the specified region
a gwaa.data-class object.
Usage
## S3 method for class 'region.ucsc'
open(chr, coords, assembly = "canFam3")
Arguments
chr
number of chromosome you want to see
coords
a vector of two values, if the argument is missing the entire chromosome will be taken into consideration
assembly
type of assembly (camFam2 or camFam3)
Value
null
Author(s)
Marcin Kierczak <Marcin.Kierczak@slu.se> , Jagoda Jablonska <jagoda100jablonska@gmail.com>
cgmisc-team/cgmisc documentation built on Jan. 3, 2024, 9:52 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/open.region.UCSC.R
| open.region.ucsc | R Documentation |
Open UCSC GenomeBrowser for selected region
Description
open.region.UCSC redirects you to the UCSC GenomeBrowser and shows the specified region
a gwaa.data-class object.
Usage
## S3 method for class 'region.ucsc'
open(chr, coords, assembly = "canFam3")
Arguments
chr |
number of chromosome you want to see |
coords |
a vector of two values, if the argument is missing the entire chromosome will be taken into consideration |
assembly |
type of assembly (camFam2 or camFam3) |
Value
null
Author(s)
Marcin Kierczak <Marcin.Kierczak@slu.se> , Jagoda Jablonska <jagoda100jablonska@gmail.com>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.