Files in cgmisc-team/cgmisc
Various functions useful in computational genetics, e.g. in GWAS.

.gitignore
DESCRIPTION
NAMESPACE
R/.Rapp.history
R/.Rhistory
R/bigRR.data.r R/boxplot.snp.R R/boxplot.snp.twoWay.R R/choose.top.snps.R R/chr.x.fix.canfam.r R/clump.markers.r R/compute.Fstats.r R/create.Haploview.info.r R/epistasis.scan.R R/fstats.result.r R/get.LD.colors.r R/get.adjacent.markers.r R/get.chr.midpoints.r R/get.erv.R R/get.overlap.windows.r R/get.roh.R R/gwaa.to.bed.r R/gwaa.to.bigrr.r R/gwaa.to.phase.r R/gwaa.to.vgwas.r R/het.overlap.wind.R R/open.region.UCSC.R R/pac.result.r R/phase.to.fasta.r R/phase.to.haploview.r R/plot.LD.decay.r R/plot.clumps.r R/plot.erv.r R/plot.fstats.r R/plot.genes.R R/plot.manhattan.LD.r R/plot.manhattan.genes.r R/plot.overlap.R R/plot.pac.r R/plot.qq.r R/pop.allele.counts.r R/zzz.R
README
cgmisc_2.9.10.tar.gz
data/cgmisc_data.rda
dev/.Rapp.history
dev/.Rhistory
dev/__plot.qq.r
dev/desktop.ini
dev/dev_get.overlapping.windows.r dev/dev_get.window.means.r dev/dev_gwaa2bedLD.R dev/dev_haploplot.r dev/dev_plot.genes.r dev/dev_roh.r dev/dev_windows.r dev/haploplot_devel.r
inst/extdata/canFam3.1.prot.bed
inst/extdata/canFam3cgmisc.db
man/bigRR.data.Rd man/boxplot.snp.Rd man/boxplot.snp.twoWay.Rd man/cgmisc.Rd man/choose.top.snps.Rd man/chr.x.fix.canfam.Rd man/clump.markers.Rd man/compute.fstats.Rd man/create.haploview.info.Rd man/epistasis.scan.Rd man/fstats.result.Rd man/get.adjacent.markers.Rd man/get.chr.midpoints.Rd man/get.erv.Rd man/get.ld.colors.Rd man/get.overlap.windows.Rd man/get.roh.Rd man/gwaa.to.bed.Rd man/gwaa.to.bigrr.Rd man/gwaa.to.phase.Rd man/gwaa.to.vgwas.Rd man/het.overlap.wind.Rd man/open.region.ucsc.Rd man/pac.result.Rd man/phase.to.fasta.Rd man/phase.to.haploview.Rd man/plot.clumps.Rd man/plot.erv.Rd man/plot.fstats.Rd man/plot.genes.Rd man/plot.ld.decay.Rd man/plot.manhattan.genes.Rd man/plot.manhattan.ld.Rd man/plot.overlap.Rd man/plot.pac.Rd man/plot.qq.Rd man/pop.allele.counts.Rd
vignette/.gitignore
vignette/vignette.Rmd
vignette/vignette.bib
vignette/vignette.pdf
cgmisc-team/cgmisc documentation built on May 12, 2017, 1:18 a.m.