moveNfCoFastqFiles: move fastq files from lts to scratch for nf-co/rnaseq...
In cmatKhan/brentlabRnaSeqTools: A Collection of Functions to Interact with the Brentlab RNASeq Database
Description
Usage
Arguments
Value
View source: R/processing_pipeline.R
Description
using the samplesheet created by createNfCorePipelineSampleSheet,
create a file to move fastq files from lts to scratch
Usage
1
moveNfCoFastqFiles(nf_co_samplesheet, from_prefix)
Arguments
nf_co_samplesheet
a samplesheet created by
createNfCorePipelineSamplesheet() with the prefixes set to what the path will
be once the files are moved to scratch
from_prefix
filepath from source up to the filename of the file
Value
a dataframe with two columns, source and destination
cmatKhan/brentlabRnaSeqTools documentation built on Nov. 17, 2021, 5:47 a.m.
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Description Usage Arguments Value
View source: R/processing_pipeline.R
Description
using the samplesheet created by createNfCorePipelineSampleSheet, create a file to move fastq files from lts to scratch
Usage
1 | moveNfCoFastqFiles(nf_co_samplesheet, from_prefix)
|
Arguments
nf_co_samplesheet |
a samplesheet created by createNfCorePipelineSamplesheet() with the prefixes set to what the path will be once the files are moved to scratch |
from_prefix |
filepath from source up to the filename of the file |
Value
a dataframe with two columns, source and destination
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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