rlePlot_helper: the actual plotting function for rlePlot

Description Usage Arguments Value

Description

the actual plotting function for rlePlot

Usage

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rlePlot_helper(
  count_df,
  log2_transformed_flag,
  title,
  gene_id_path = Sys.getenv("GENE_ID_PATH")
)

Arguments

count_df

counts in gene x sample

log2_transformed_flag

boolean where TRUE indicates the counts are in log2 space

title

title of the output plot

gene_id_path

path to gene_ids. Default set to read from Sys.getenv("GENE_ID_PATH")

Value

a ggplot


cmatKhan/brentlabRnaSeqTools documentation built on Nov. 17, 2021, 5:47 a.m.