plot_ordering_genes: Plots genes by mean vs. dispersion, highlighting those...
In cole-trapnell-lab/monocle-release: Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq
Description
Each gray point in the plot is a gene. The black dots are those that were included
in the last call to setOrderingFilter. The red curve shows the mean-variance
model learning by estimateDispersions().
Usage
1
plot_ordering_genes(cds)
Arguments
cds
The CellDataSet to be used for the plot.
cole-trapnell-lab/monocle-release documentation built on May 13, 2019, 8:50 p.m.
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Description
Each gray point in the plot is a gene. The black dots are those that were included in the last call to setOrderingFilter. The red curve shows the mean-variance model learning by estimateDispersions().
Usage
1 | plot_ordering_genes(cds)
|
Arguments
cds |
The CellDataSet to be used for the plot. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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