Nuclei Analysis Toolkit

.process_dirichlet_fit

R Documentation

Process the fit model to generate an accessible summary data.frame

Description

Process the fit model to generate an accessible summary data.frame

Usage

.process_dirichlet_fit(fit, dependent_var, celltype_var, ...)

Arguments

`fit`	a model generated by `DirichletReg::DirichReg`
`dependent_var`	the name of the colData variable for contrasts
`celltype_var`	the colData variable specifying celltype or subtype

Value

pvals a long format data frame with accessible pvalues

Other helper: .append_cell_metric_plots_sce(), .append_cell_prop_plots_sce(), .clean_ggplot_plot_env(), .clean_ggplot_quosures(), .clean_quosure_env(), .fancy_scientific(), .get_d_palette(), .grobify_ggplot(), .model_fisher_celltype(), .plot_dirichlet_results(), .plot_unique_id_var(), .prepare_dirichlet_plot_table(), .prepare_fisher_counts_table(), .prepare_unique_id_var_plot_table(), .retrieve_covariates(), .tally_cells(), .uniftest()