read_sparse_matrix: Read a feature-barcode matrix
In combiz/scFlow: A Single-Cell/Nuclei Analysis Toolkit
View source: R/read_sparse_matrix.R
read_sparse_matrix R Documentation
Read a feature-barcode matrix
Description
Reads a feature-barcode matrix folder into a sparse matrix. This folder is
output by cellranger and must contain a 'barcodes.tsv.gz', 'features.tsv.gz',
and 'matrix.mtx.gz' file.
Usage
read_sparse_matrix(folder_path)
Arguments
folder_path
path to folder containing feature-barcode matrix files
Value
mat a sparse matrix with rownames and colnames
See Also
Other import and export functions:
read_celltype_mappings(),
read_sce(),
write_celltype_mappings(),
write_sce(),
write_sparse_matrix()
combiz/scFlow documentation built on Feb. 25, 2024, 10:25 a.m.
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View source: R/read_sparse_matrix.R
| read_sparse_matrix | R Documentation |
Read a feature-barcode matrix
Description
Reads a feature-barcode matrix folder into a sparse matrix. This folder is output by cellranger and must contain a 'barcodes.tsv.gz', 'features.tsv.gz', and 'matrix.mtx.gz' file.
Usage
read_sparse_matrix(folder_path)
Arguments
folder_path |
path to folder containing feature-barcode matrix files |
Value
mat a sparse matrix with rownames and colnames
See Also
Other import and export functions:
read_celltype_mappings(),
read_sce(),
write_celltype_mappings(),
write_sce(),
write_sparse_matrix()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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