Description Usage Arguments Value Examples
Plot scatter plot of log10 depth vs FRIP or TSS score for scATACseq data
1 2 | PlotScatter(df, y = "FRIP", barcodes = NULL, hline = 0.6,
vline = 3, col = "red")
|
df |
A dataframe with at least 3 columns with names: cells, depth, FRIP or cells, depth, tss_score |
y |
x-axis will always be the log10(depth), y could be FRIP or tss_score |
barcodes |
a vector of valid barcodes |
hline |
dotted hline cutoff |
vline |
dotted vline cutoff |
col |
color of the dotted vline and hline |
a ggplot2 scatter plot
1 2 3 4 5 6 | ## Not run:
PlotScatter(frip, y = "FRIP")
PlotScatter(tss_scores, y = "tss_score")
## End(Not run)
|
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