PlotScatter: Plot scatter plot of log10 depth vs FRIP or TSS score for...

In crazyhottommy/scATACutils: What the Package Does (One Line, Title Case)

Description

Plot scatter plot of log10 depth vs FRIP or TSS score for scATACseq data

Usage

PlotScatter(df, y = "FRIP", barcodes = NULL, hline = 0.6,
  vline = 3, col = "red")

Arguments

df	A dataframe with at least 3 columns with names: cells, depth, FRIP or cells, depth, tss_score
y	x-axis will always be the log10(depth), y could be FRIP or tss_score
barcodes	a vector of valid barcodes
hline	dotted hline cutoff
vline	dotted vline cutoff
col	color of the dotted vline and hline

Value

a ggplot2 scatter plot

Examples

## Not run: 

PlotScatter(frip, y = "FRIP")
PlotScatter(tss_scores, y = "tss_score")

## End(Not run)

crazyhottommy/scATACutils documentation built on June 15, 2020, 9:31 p.m.