get_banding_score: Calculate banding score for a single cell
In crazyhottommy/scATACutils: What the Package Does (One Line, Title Case)
Description
Usage
Arguments
Value
View source: R/CalculateBandingScore.R
Description
A banding score is a measure signals of nucleosomal periodicity in their fragment size distribution.
see Darren et.al.2018
Usage
1
Arguments
df
A dataframe with 3 columns. cell column contains the cell barcode for a single cell, insert_size column contains the insert size, read_count
column contains the number of paired reads for that insert size.
Value
A banding score for that cell
crazyhottommy/scATACutils documentation built on June 15, 2020, 9:31 p.m.
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Description Usage Arguments Value
View source: R/CalculateBandingScore.R
Description
A banding score is a measure signals of nucleosomal periodicity in their fragment size distribution. see Darren et.al.2018
Usage
1 |
Arguments
df |
A dataframe with 3 columns. cell column contains the cell barcode for a single cell, insert_size column contains the insert size, read_count column contains the number of paired reads for that insert size. |
Value
A banding score for that cell
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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