BreakPoint: BreakPoint object

BreakPointR Documentation

BreakPoint object

Description

The BreakPoint object is output of the function runBreakpointr and is basically a list with various entries. The class() attribute of this list was set to "BreakPoint". Entries can be accessed with the list operators '[[]]' and '$'.

Value

fragments

A GRanges-class object with read fragments.

deltas

A GRanges-class object with deltaWs.

breaks

A GRanges-class object containing the breakpoint coordinates.

counts

A GRanges-class object with the regions between breakpoints.

params

A vector with parameters that were used to obtain the results.

See Also

runBreakpointr


daewoooo/breakpointR documentation built on Aug. 4, 2022, 11:21 p.m.