removeDoubleSCEs: Process double SCE chromosomes: with internal WC region.
In daewoooo/breakpointR: Find breakpoints in Strand-seq data
removeDoubleSCEs R Documentation
Process double SCE chromosomes: with internal WC region.
Description
This function will take from a double SCE chromosome only WW or CC region (Longer region is taken).
Usage
removeDoubleSCEs(gr, collapseWidth = 5e+06)
Arguments
gr
A GRanges-class object.
collapseWidth
A segment size to be collapsed with neighbouring segments.
Value
The input GRanges-class object with only WW or CC region retained.
daewoooo/breakpointR documentation built on April 20, 2023, 4:13 p.m.
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| removeDoubleSCEs | R Documentation |
Process double SCE chromosomes: with internal WC region.
Description
This function will take from a double SCE chromosome only WW or CC region (Longer region is taken).
Usage
removeDoubleSCEs(gr, collapseWidth = 5e+06)
Arguments
gr |
A |
collapseWidth |
A segment size to be collapsed with neighbouring segments. |
Value
The input GRanges-class object with only WW or CC region retained.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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