davidcoffey/LymphoSeq: Analyze high-throughput sequencing of T and B cell receptors

This R package analyzes high-throughput sequencing of T and B cell receptor complementarity determining region 3 (CDR3) sequences generated by Adaptive Biotechnologies' ImmunoSEQ assay. Its input comes from tab-separated value (.tsv) files exported from the ImmunoSEQ analyzer.

Getting started

Package details

AuthorDavid Coffey <[email protected]>
Bioconductor views Alignment MultipleSequenceAlignment Sequencing Software TargetedResequencing Technology
MaintainerDavid Coffey <[email protected]tch.org>
LicenseArtistic-2.0
Version1.5.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("davidcoffey/LymphoSeq")
davidcoffey/LymphoSeq documentation built on May 14, 2019, 11:09 p.m.