davidcoffey/LymphoSeq: Analyze high-throughput sequencing of T and B cell receptors

This R package analyzes high-throughput sequencing of T and B cell receptor complementarity determining region 3 (CDR3) sequences generated by Adaptive Biotechnologies' ImmunoSEQ assay. Its input comes from tab-separated value (.tsv) files exported from the ImmunoSEQ analyzer.

Getting started

Package details

AuthorDavid Coffey <dcoffey@fredhutch.org>
Bioconductor views Alignment MultipleSequenceAlignment Sequencing Software TargetedResequencing Technology
MaintainerDavid Coffey <dcoffey@fredhutch.org>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
davidcoffey/LymphoSeq documentation built on Dec. 31, 2019, 9:52 p.m.