Biocview "Technology"

Accessory Methods for the Analysis of Oxford Nanopore Technologies DNA Sequence Data

Adaptive processing of LC-MS data

A generic R plugin dispatcher for BASE

Algorithms for Calculating Microarray Enrichment (ACME)

Analyze high-throughput sequencing of T and B cell receptors

An integrated analysis package of Gene expression and Copy number alteration

An integrated analysis package of miRNA and mRNA expression data

A package of creating an algorithm of identifying microRNA-competing endogenous RNA triplets

Assessment of duplication rates in RNA-Seq datasets

A tool to calculate and validate primers for Golden Gate Cloning

Automated analysis of CRISPR experiments

Calculate the lagged correlation between two time-series data (wearable and omics data)

CIMICE-R: (Markov) Chain Method to Inferr Cancer Evolution

Conducts pathway test of metabolomics data using a weighted permutation test

Coverage visualization package for R

Data structures, clustering and testing for single cell immune receptor repertoires (scRNAseq RepSeq/AIRR-seq)

Detection of de novo deletion in targeted sequencing trios

Detection of Differentially Methylated Regions

ELBOW - Evaluating foLd change By the lOgit Way

Framework for Storing and Accessing Hi-C Data Through HDF Files

Functions to creation of low dimensional comparative matrices of Amino Acid Sequence occurrences

Interactive visualization of scRNA-seq data with Cerebro

LPEseq: local-pooled-error test for RNA-seq data with a small number of replicates

Methods for Spike-in Arrays

Multiplex PCR Primer Design and Analysis

Network-based prioritization of putative metabolite IDs

Non-detects in qPCR data

Normalisation Tools for Inter-Condition Variability of ChIP-Seq Data

optimalFlow

Phylogenetic Reconstruction and Analysis

Pooling RNA-seq datasets for assembling transcript models

Predict open reading frames in nucleotide sequences

RNAseq and qPCR signal comparison

Robust Inference for Absolute Abundance in Microbiome Analysis

ScRNA-seq Workflow CONCLUS - From CONsensus CLUSters To A Meaningful CONCLUSion

Sensitive and highly resolved identification of RNA-protein interaction sites in PAR-CLIP data

Shiny Application for Multiplex PCR Primer Design and Analysis

Single Cell RNA-Seq UMI Filtering Facilitator (scruff)

Statistical analysis of single molecule trajectories

Targeted scRNA-seq primer design for TAP-seq