API for dbdimitrov/BugleSeq
BingleSeq RNA-Seq Data Analysis

Global functions
barTable Man page Source code
batchComBat Man page Source code
batchHarman Man page Source code
bulk_compData Man page Source code
bulk_compDataUI Man page Source code
bulk_deData Man page Source code
bulk_deDataUI Man page Source code
bulk_faData Man page Source code
bulk_faDataUI Man page Source code
bulk_filterData Man page Source code
bulk_filterDataUI Man page Source code
bulk_goData Man page Source code
bulk_goDataUI Man page Source code
bulk_loadData Man page Source code
bulk_loadDataUI Man page Source code
bulk_plotData Man page Source code
bulk_plotDataUI Man page Source code
clusterMonocle Man page Source code
convert_gene_type Man page Source code
deEdgeR Man page
deLimma Man page
dePipelineCaller Man page
deSequence Man page
fetch_regulons Man page Source code
fetch_tf_activities Man page Source code
fetch_tfs_per_sample Man page Source code
filterFunction Man page Source code
genePlot Man page Source code
generateIntersect Man page Source code
generateSummary Man page Source code
getAllDE Man page Source code
getClusterHeatmap Man page Source code
getDEgenes Man page Source code
getGenesetsGO Man page Source code
getIntersect Man page Source code
get_pathway_activity Man page Source code
get_pathway_activity_per_sample Man page Source code
get_progeny_scatter Man page Source code
goInfo Man page Source code
histGoTerms Man page Source code
load10xData Man page Source code
normalizeSeurat Man page Source code
plotAllVenn Man page Source code
plotBarChart Man page Source code
plotHeatmapTop Man page Source code
plotMA Man page Source code
plotPCA Man page Source code
plotScree Man page Source code
plotVP Man page Source code
plot_tfa_per_sample Man page Source code
plot_top_tfs Man page Source code
qcHist Man page Source code
rankConsesus Man page Source code
runGOSEQ Man page Source code
sc3Cluster Man page Source code
sc_clust Man page Source code
sc_clustUI Man page Source code
sc_comp Man page Source code
sc_compUI Man page Source code
sc_de Man page Source code
sc_deUI Man page Source code
sc_dorothea_plot Man page Source code
sc_dorothea_viper Man page Source code
sc_faUI Man page Source code
sc_fa_Server Man page Source code
sc_getAllDE Man page Source code
sc_getDEgenes Man page Source code
sc_go Man page Source code
sc_goUI Man page Source code
sc_loadData Man page Source code
sc_loadDataUI Man page Source code
sc_norm Man page Source code
sc_normUI Man page Source code
sc_progeny Man page Source code
sc_progeny_plot Man page Source code
sc_qc Man page Source code
sc_qcUI Man page Source code
server Man page Source code
seuratElbow Man page Source code
seuratQC Man page Source code
startBingleSeq Man page Source code
sueratClust Man page Source code
ui Man page
dbdimitrov/BugleSeq documentation built on July 17, 2021, 1:02 p.m.