weight_rollmean: Expressional smoothing along a chromosome using a weighted...
In dkzhang777/SlideCNA: Calls Copy Number Alterations from Slide-Seq Data
weight_rollmean R Documentation
Expressional smoothing along a chromosome using a weighted pyramidal moving average
Description
Take in a data.table of genomic positions and bead normalized/modified counts and apply pyramidal weighting
with a window size k to create smoothed expression intensities
Usage
weight_rollmean(dat, k = 101)
Arguments
dat
data.table of normalized/adjusted counts
k
size of window for weighting
Value
A data.table of expression intensities
dkzhang777/SlideCNA documentation built on Jan. 25, 2025, 5:53 p.m.
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| weight_rollmean | R Documentation |
Expressional smoothing along a chromosome using a weighted pyramidal moving average
Description
Take in a data.table of genomic positions and bead normalized/modified counts and apply pyramidal weighting with a window size k to create smoothed expression intensities
Usage
weight_rollmean(dat, k = 101)
Arguments
dat |
data.table of normalized/adjusted counts |
k |
size of window for weighting |
Value
A data.table of expression intensities
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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