Files in e-sensing/sits

Satellite Image Time Series Analysis for Earth Observation Data Cubes

.Rbuildignore

.Rinstignore

.github/.gitignore

.github/ISSUE_TEMPLATE/bug_report.md .github/ISSUE_TEMPLATE/improvement_request.md .github/ISSUE_TEMPLATE/new_api_function.md .github/ISSUE_TEMPLATE/other_issue.md

.github/workflows/R-CMD-check.yaml

.gitignore

CODE_OF_CONDUCT.md

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md R/RcppExports.R R/api_accessors.R R/api_accuracy.R R/api_apply.R R/api_band.R R/api_bbox.R R/api_block.R R/api_check.R R/api_chunks.R R/api_classify.R R/api_clean.R R/api_cluster.R R/api_colors.R R/api_combine_predictions.R R/api_comp.R R/api_conf.R R/api_csv.R R/api_cube.R R/api_data.R R/api_debug.R R/api_download.R R/api_factory.R R/api_file.R R/api_file_info.R R/api_gdal.R R/api_gdalcubes.R R/api_imputation.R R/api_jobs.R R/api_label_class.R R/api_mixture_model.R R/api_ml_model.R R/api_mosaic.R R/api_parallel.R R/api_period.R R/api_plot_raster.R R/api_plot_time_series.R R/api_plot_vector.R R/api_point.R R/api_predictors.R R/api_raster.R R/api_raster_sub_image.R R/api_raster_terra.R R/api_reclassify.R R/api_regularize.R R/api_roi.R R/api_s2tile.R R/api_samples.R R/api_segments.R R/api_sf.R R/api_shp.R R/api_signal.R R/api_smooth.R R/api_smote.R R/api_som.R R/api_source.R R/api_source_aws.R R/api_source_bdc.R R/api_source_deafrica.R R/api_source_hls.R R/api_source_local.R R/api_source_mpc.R R/api_source_sdc.R R/api_source_stac.R R/api_source_usgs.R R/api_space_time_operations.R R/api_stac.R R/api_stats.R R/api_summary.R R/api_tibble.R R/api_tile.R R/api_timeline.R R/api_torch.R R/api_torch_psetae.R R/api_ts.R R/api_tuning.R R/api_uncertainty.R R/api_utils.R R/api_values.R R/api_variance.R R/api_vector.R R/api_vector_info.R R/api_view.R R/data.R R/sits-package.R R/sits_accuracy.R R/sits_active_learning.R R/sits_apply.R R/sits_bands.R R/sits_bbox.R R/sits_classify.R R/sits_clean.R R/sits_cluster.R R/sits_colors.R R/sits_combine_predictions.R R/sits_config.R R/sits_csv.R R/sits_cube.R R/sits_cube_copy.R R/sits_factory.R R/sits_filters.R R/sits_geo_dist.R R/sits_get_data.R R/sits_label_classification.R R/sits_labels.R R/sits_lighttae.R R/sits_machine_learning.R R/sits_merge.R R/sits_mixture_model.R R/sits_mlp.R R/sits_model_export.R R/sits_mosaic.R R/sits_patterns.R R/sits_plot.R R/sits_predictors.R R/sits_reclassify.R R/sits_regularize.R R/sits_resnet.R R/sits_sample_functions.R R/sits_segmentation.R R/sits_select.R R/sits_sf.R R/sits_smooth.R R/sits_som.R R/sits_summary.R R/sits_tae.R R/sits_tempcnn.R R/sits_timeline.R R/sits_train.R R/sits_tuning.R R/sits_uncertainty.R R/sits_utils.R R/sits_validate.R R/sits_variance.R R/sits_view.R R/sits_xlsx.R R/zzz.R README.Rmd README.md

codecov.yml

codemeta.json

contributing.md

data/cerrado_2classes.rda

data/point_mt_6bands.rda

data/samples_l8_rondonia_2bands.rda

data/samples_modis_ndvi.rda

demo/00Index

demo/classify_cbers_bdc.R demo/classify_deeplearning.R demo/classify_raster_rfor.R demo/classify_ts.R demo/dl_comparison.R demo/evaluate_samples_Kohonen.R demo/ml_comparison.R

inst/CITATION

inst/Distances/distance.cpp

inst/WORDLIST

inst/extdata/accuracy/sample_size_stratified_simple_random.xlsx

inst/extdata/colors/africa_ecosystem_colors.xml

inst/extdata/colors/us_national_map.gpl

inst/extdata/config.yml

inst/extdata/config_colors.yml

inst/extdata/config_internals.yml

inst/extdata/config_user_example.yml

inst/extdata/cran/check_package_cran.R

inst/extdata/markdown/figures/datacube_conception.jpg

inst/extdata/markdown/figures/sits_general_view.jpg

inst/extdata/qgis/qgis_style_bottom.xml

inst/extdata/qgis/qgis_style_top.xml

inst/extdata/raster/classif/SENTINEL2_MSI_20LNR_2020-06-04_2021-08-26_class_v1.tif

inst/extdata/raster/gdal/template.tif

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2013-09-14.jp2

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2013-10-16.jp2

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2013-11-17.jp2

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2013-12-19.jp2

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2014-01-17.jp2

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2014-02-18.jp2

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2014-03-22.jp2

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2014-04-23.jp2

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2014-05-25.jp2

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2014-06-26.jp2

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2014-07-28.jp2

inst/extdata/raster/mod13q1/TERRA_MODIS_012010_NDVI_2014-08-29.jp2

inst/extdata/raster/probs/sinop_2014_probs_2013-09-01_2014-08-30_v1.tif

inst/extdata/raster/prodes/PRODES_LANDSAT_AMZ_2000-08-01_2020-07-31_class_v20220606.tif

inst/extdata/s2-tiles/tiles.rds

inst/extdata/samples/samples_amazonia.csv

inst/extdata/samples/samples_sinop_crop.csv

inst/extdata/segment/supercells.R

inst/extdata/shapefiles/bdc-test/samples.dbf

inst/extdata/shapefiles/bdc-test/samples.prj

inst/extdata/shapefiles/bdc-test/samples.shp

inst/extdata/shapefiles/bdc-test/samples.shx

inst/extdata/shapefiles/cerrado/cerrado_forested.dbf

inst/extdata/shapefiles/cerrado/cerrado_forested.prj

inst/extdata/shapefiles/cerrado/cerrado_forested.shp

inst/extdata/shapefiles/cerrado/cerrado_forested.shx

inst/extdata/shapefiles/mato_grosso/mt.dbf

inst/extdata/shapefiles/mato_grosso/mt.prj

inst/extdata/shapefiles/mato_grosso/mt.shp

inst/extdata/shapefiles/mato_grosso/mt.shx

inst/extdata/stac/polygon_example.json

inst/extdata/sticker/sits_sticker.png

man/cerrado_2classes.Rd man/dot-check_date_parameter.Rd

man/figures/README-unnamed-chunk-10-1.png

man/figures/README-unnamed-chunk-9-1.png

man/plot.Rd man/plot.class_cube.Rd man/plot.class_vector_cube.Rd man/plot.geo_distances.Rd man/plot.patterns.Rd man/plot.predicted.Rd man/plot.probs_cube.Rd man/plot.probs_vector_cube.Rd man/plot.raster_cube.Rd man/plot.rfor_model.Rd man/plot.sits_accuracy.Rd man/plot.sits_cluster.Rd man/plot.som_evaluate_cluster.Rd man/plot.som_map.Rd man/plot.torch_model.Rd man/plot.uncertainty_cube.Rd man/plot.uncertainty_vector_cube.Rd man/plot.variance_cube.Rd man/plot.vector_cube.Rd man/plot.xgb_model.Rd man/point_mt_6bands.Rd man/print.sits_accuracy.Rd man/print.sits_area_accuracy.Rd man/samples_l8_rondonia_2bands.Rd man/samples_modis_ndvi.Rd man/sits-package.Rd man/sits_accuracy.Rd man/sits_accuracy_summary.Rd man/sits_apply.Rd man/sits_as_sf.Rd man/sits_bands.Rd man/sits_bbox.Rd man/sits_classify.Rd man/sits_clean.Rd man/sits_cluster_clean.Rd man/sits_cluster_dendro.Rd man/sits_cluster_frequency.Rd man/sits_colors.Rd man/sits_colors_qgis.Rd man/sits_colors_reset.Rd man/sits_colors_set.Rd man/sits_colors_show.Rd man/sits_combine_predictions.Rd man/sits_confidence_sampling.Rd man/sits_config.Rd man/sits_config_show.Rd man/sits_cube.Rd man/sits_cube_copy.Rd man/sits_factory_function.Rd man/sits_filter.Rd man/sits_formula_linear.Rd man/sits_formula_logref.Rd man/sits_geo_dist.Rd man/sits_get_data.Rd man/sits_kfold_validate.Rd man/sits_label_classification.Rd man/sits_labels.Rd man/sits_labels_summary.Rd man/sits_lighttae.Rd man/sits_list_collections.Rd man/sits_merge.Rd man/sits_mixture_model.Rd man/sits_mlp.Rd man/sits_model_export.Rd man/sits_mosaic.Rd man/sits_patterns.Rd man/sits_pred_features.Rd man/sits_pred_normalize.Rd man/sits_pred_reference.Rd man/sits_pred_sample.Rd man/sits_predictors.Rd man/sits_reclassify.Rd man/sits_reduce_imbalance.Rd man/sits_regularize.Rd man/sits_resnet.Rd man/sits_rfor.Rd man/sits_run_examples.Rd man/sits_run_tests.Rd man/sits_sample.Rd man/sits_sampling_design.Rd man/sits_segment.Rd man/sits_select.Rd man/sits_sgolay.Rd man/sits_show_prediction.Rd man/sits_slic.Rd man/sits_smooth.Rd man/sits_som.Rd man/sits_som_clean_samples.Rd man/sits_som_evaluate_cluster.Rd man/sits_stats.Rd man/sits_svm.Rd man/sits_tae.Rd man/sits_tempcnn.Rd man/sits_timeline.Rd man/sits_to_csv.Rd man/sits_to_xlsx.Rd man/sits_train.Rd man/sits_tuning.Rd man/sits_tuning_hparams.Rd man/sits_uncertainty.Rd man/sits_uncertainty_sampling.Rd man/sits_validate.Rd man/sits_variance.Rd man/sits_view.Rd man/sits_whittaker.Rd man/sits_xgboost.Rd man/summary.class_cube.Rd man/summary.raster_cube.Rd man/summary.sits.Rd man/summary.sits_accuracy.Rd man/summary.sits_area_accuracy.Rd man/tick-sits_labels-set-tick.Rd

sits.Rproj

src/Makevars

src/Makevars.win

src/RcppExports.cpp

src/combine_data.cpp

src/kernel.cpp

src/label_class.cpp

src/linear_interp.cpp

src/nnls_solver.cpp

src/normalize_data.cpp

src/normalize_data_0.cpp

src/sample_points.cpp

src/sampling_window.cpp

src/smooth.cpp

src/smooth_bayes.cpp

src/smooth_sgp.cpp

src/smooth_whit.cpp

src/uncertainty.cpp

tests/testthat.R tests/testthat/test-accuracy.R tests/testthat/test-active_learning.R tests/testthat/test-api_block.R tests/testthat/test-api_point.R tests/testthat/test-apply.R tests/testthat/test-bands.R tests/testthat/test-check.R tests/testthat/test-classification.R tests/testthat/test-clustering.R tests/testthat/test-color.R tests/testthat/test-combine_predictions.R tests/testthat/test-compare.R tests/testthat/test-config.R tests/testthat/test-cube.R tests/testthat/test-cube_copy.R tests/testthat/test-data.R tests/testthat/test-debug.R tests/testthat/test-distances.R tests/testthat/test-factory.R tests/testthat/test-file_info.R tests/testthat/test-filtering.R tests/testthat/test-internals.R tests/testthat/test-labels.R tests/testthat/test-mixture_model.R tests/testthat/test-ml.R tests/testthat/test-mosaic.R tests/testthat/test-parallel.R tests/testthat/test-plot.R tests/testthat/test-plot_distances.R tests/testthat/test-predictors.R tests/testthat/test-raster.R tests/testthat/test-reclassify.R tests/testthat/test-regularize.R tests/testthat/test-roi.R tests/testthat/test-samples.R tests/testthat/test-segmentation.R tests/testthat/test-sf.R tests/testthat/test-som.R tests/testthat/test-space-time-operations.R tests/testthat/test-summary.R tests/testthat/test-tibble.R tests/testthat/test-tuning.R tests/testthat/test-uncertainty.R tests/testthat/test-utils.R tests/testthat/test-variance.R tests/testthat/test-view.R tests/testthat/test-vignette.R tests/testthat/test-zzz-external.R tests/testthat/test-zzz.R

e-sensing/sits documentation built on Jan. 28, 2024, 6:05 a.m.