dot-make_subspot_coldata: Add subspot labels and offset row/col locations before making...
In edward130603/BayesSpace: Clustering and Resolution Enhancement of Spatial Transcriptomes
.make_subspot_coldata R Documentation
Add subspot labels and offset row/col locations before making enhanced SCE.
Description
Subspots are stored as (1.1, 2.1, 3.1, ..., 1.2, 2.2, 3.2, ...)
Usage
.make_subspot_coldata(positions, sce, n_subspots_per)
Arguments
sce
Original sce (to obtain number of spots and original row/col)
n_subspots_per
Number of subspots per spot
cdata
Table of colData (imagerow and imagecol; from deconv$positions)
Value
Data frame with added subspot names, parent spot indices, and offset
row/column coordinates
edward130603/BayesSpace documentation built on May 11, 2023, 6:13 a.m.
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| .make_subspot_coldata | R Documentation |
Add subspot labels and offset row/col locations before making enhanced SCE.
Description
Subspots are stored as (1.1, 2.1, 3.1, ..., 1.2, 2.2, 3.2, ...)
Usage
.make_subspot_coldata(positions, sce, n_subspots_per)
Arguments
sce |
Original sce (to obtain number of spots and original row/col) |
n_subspots_per |
Number of subspots per spot |
cdata |
Table of colData (imagerow and imagecol; from deconv$positions) |
Value
Data frame with added subspot names, parent spot indices, and offset row/column coordinates
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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