cr_enriched_at_tss: Enrichment of cr around tss
In eilslabs/epic: Integrative Analysis and Visualization of Epigenomic Sequencing Data
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
Enrichment of cr around tss
Usage
1
cr_enriched_at_tss(cr, txdb)
Arguments
cr
filtered correlated regions from filter_correlated_regions
txdb
a GenomicFeatures::GRanges object.
Details
It visualizes how neg cr and pos cr are distributed within c(-10kb, 20kb) of gene tss.
Also the distribution of transcript will also be added. Values on y-axis represent
how many crs/transcripts cover each position relative to the tss.
Value
No value is returned.
Author(s)
Zuguang Gu <z.gu@dkfz.de>
Examples
1
2
# There is no example
NULL
eilslabs/epic documentation built on May 16, 2019, 1:24 a.m.
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Description Usage Arguments Details Value Author(s) Examples
Description
Enrichment of cr around tss
Usage
1 | cr_enriched_at_tss(cr, txdb)
|
Arguments
cr |
filtered correlated regions from |
txdb |
a |
Details
It visualizes how neg cr and pos cr are distributed within c(-10kb, 20kb) of gene tss. Also the distribution of transcript will also be added. Values on y-axis represent how many crs/transcripts cover each position relative to the tss.
Value
No value is returned.
Author(s)
Zuguang Gu <z.gu@dkfz.de>
Examples
1 2 | # There is no example
NULL
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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