plot_coverage_and_methylation_on_genome: Plot coverage and methylation for a single sample

Description Usage Arguments Details Value Author(s) Examples

Description

Plot coverage and methylation for a single sample

Usage

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plot_coverage_and_methylation_on_genome(sid, chromosome = paste0("chr", 1:22),
    species = "hg19", nw = 10000, ...)

Arguments

sid

a single sample id

chromosome

a vector of chromosome names

species

species

nw

number of windows

...

pass to gtrellis_layout

Details

The whole genome is segented by nw windows and mean methylation and mean CpG coverage are visualized as two tracks.

Value

No value is returned.

Author(s)

Zuguang Gu <z.gu@dkfz.de>

Examples

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# There is no example
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eilslabs/epic documentation built on May 16, 2019, 1:24 a.m.