input_data: Load basic data information

In espors/idepGolem: Integrated Differential Expression and Pathway Analysis

Load basic data information

Description

This function does the immediate loading of the data and sample info to present in the data preview table and the sample info table. The data undergoes very basic filtering and transformation before entering the table.

Usage

input_data(
  expression_file,
  experiment_file,
  go_button,
  demo_data_file,
  demo_metadata_file
)

Arguments

expression_file	Data file path for the expression file, should be accessed with expression_file$datapath
experiment_file	Data file path for the experiment file, should be accessed with experiment_file$datapath
go_button	TRUE/FALSE to load the demo data files
demo_data_file	Expression demo data path idep_data$demo_data_file
demo_metadata_file	Experiment demo data path idep_data$demo_metadata_file

Value

This returns a list that contains the expression data and the sample information. If there is no experiment file it only returns the expression data.

See Also

Other load data functions: convert_data(), gene_info(), get_all_gene_names()

espors/idepGolem documentation built on April 23, 2024, 1:11 p.m.