network_data: VisNetwork data

In espors/idepGolem: Integrated Differential Expression and Pathway Analysis

VisNetwork data

Description

Create VisNetwork data that can be inputted in the vis_network_plot function to create an interactive network of enriched pathways.

Usage

network_data(
  network,
  up_down_reg_deg,
  wrap_text_network_deg,
  layout_vis_deg,
  edge_cutoff_deg
)

Arguments

network	GO table from the pathway analysis
up_down_reg_deg	Plot just up/down or both
wrap_text_network_deg	Wrap the text from the pathway description
layout_vis_deg	Button to reset the layout of the network
edge_cutoff_deg	P-value to cutoff enriched pathways

Value

Data that can be inputted in the vis_network_plot function to create an interactive network.

espors/idepGolem documentation built on Oct. 27, 2024, 4:56 a.m.