rowname_id_swap: Swap rowname IDs for data matrix

In espors/idepGolem: Integrated Differential Expression and Pathway Analysis

Swap rowname IDs for data matrix

Description

This function uses the all_gene_names dataframe to swap the current rownames of a data matrix with the desired gene ID. For instance, if the rownames were currently ensembl, this function is able to switch them back to the original form.

Usage

rowname_id_swap(data_matrix, all_gene_names, select_gene_id)

Arguments

data_matrix	Data matrix with ensembl or user gene ID rownames
all_gene_names	Data frame of gene names
select_gene_id	String designating the desired ID type for rownames ("User_ID", "ensembl_ID", "symbol")

Value

Data matrix with changed rownames

espors/idepGolem documentation built on April 23, 2024, 1:11 p.m.