sd_density: Density plot of data standard deviation

In espors/idepGolem: Integrated Differential Expression and Pathway Analysis

Density plot of data standard deviation

Description

Draw a density plot of the standard deviation in the data. The function also adds a vertical red lines for a specified range of genes.

Usage

sd_density(data, n_genes_max)

Arguments

data	Data matrix that has been through pre-processing
n_genes_max	Integer for the upper limit of gene range

Value

Formatted density plot of the standard deviation distribution.

See Also

Other plots: PCA_plot(), chr_counts_ggplot(), chr_normalized_ggplot(), cor_plot(), draw_sample_tree(), eda_boxplot(), eda_density(), eda_scatter(), gene_counts_ggplot(), individual_plots(), k_means_elbow(), mean_sd_plot(), rRNA_counts_ggplot(), t_SNE_plot(), total_counts_ggplot()

Other clustering functions: cluster_heat_click_info(), draw_sample_tree(), heat_sub(), heatmap_main(), k_means_elbow(), process_heatmap_data(), sub_heat_ann()

espors/idepGolem documentation built on Oct. 27, 2024, 4:56 a.m.